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Nitrogen Fixing Trees – The Multipurpose Pioneers

The myths about the wonders of nitrogen fixing trees are many. Craig Elevitch (see bio at bottom) and Kim Wilkinson explain how to use them effectively.

Nitrogen Fixing Trees for Permaculture

Flowers of the leguminous tree, Kowhai,
the national flower of New Zealand

Nitrogen fixation is a pattern of nutrient cycling which has successfully been used in perennial agriculture for millennia. This article focuses on legumes, which are nitrogen fixers of particular importance in agriculture. Specifically, three legumes (nitrogen fixing trees, hereafter called NFTs) are especially valuable in subtropical and tropical permaculture. They can be integrated in a permaculture system to restore nutrient cycling and fertility self-reliance.

On unvegetated sites, “pioneer” plants (plants which grow and thrive in harsh, low-fertility conditions) begin the cycling of nutrients by mining and accumulating available nutrients. As more nutrients enter the biological system and vegetative cover is established, conditions for other non-pioneering species become favourable. Pioneers like NFTs tend to benefit other forms of life by boosting fertility and moderating harsh conditions.

Nitrogen fixing trees are often deep rooted, which allows them to gain access to nutrients in subsoil layers. Their constant leaf drop nourishes soil life, which in turn can support more plant life. The extensive root system stabilises soil, while constantly growing and atrophying, adding organic matter to the soil while creating channels for aeration. There are many species of NFTs that can also provide numerous useful products and functions, including food, wind protection, shade, animal fodder, fuel wood, living fence, and timber, in addition to providing nitrogen to the system.

Nitrogen: From the Air to the Plants

Nitrogen is often referred to as a primary limiting nutrient in plant growth. Simply put, when nitrogen is not available plants stop growing. Although lack of nitrogen is often viewed as a problem, nature has an immense reserve of nitrogen everywhere plants grow – in the air. Air consists of approximately 80% nitrogen gas (N2), representing about 6400kg of N2 above every hectare of land. However, N2 is a stable gas, normally unavailable to plants. Nitrogen fixation, a process by which certain plants “fix” or gather atmospheric N2 and make it biologically available is an underlying pattern in nature (see separate box on how this process works).

How to Use NFTs in a System

In the tropics, most of the available nutrients (over 75%) are not in the soil but in the organic matter. In subtropical and tropical forests, nutrients are constantly cycling through the ecosystem. Aside from enhancing overall fertility by accumulating nitrogen and other nutrients, NFTs establish readily, grow rapidly, and regrow easily from pruning. They are perfectly suited to jump-start organic matter production on a site, creating an abundant source of nutrient-rich mulch for other plants. Many fast-growing NFTs can be cut back regularly over several years for mulch production.

The NFTs may be integrated into a system in many different ways including clump plantings, alley cropping, contour hedgerows, shelter belts, or single distribution plantings. As part of a productive system, they can serve many functions: microclimate for shade-loving crops like coffee or citrus (cut back seasonally to encourage fruiting); trellis for vine crops like vanilla, pepper, and yam; mulch banks for home gardens; and living fence and fodder sources from around animals fields.

A Caution

As the goal in permaculture is to foster a productive and stable ecosystem, rather than for example to add nitrogen to the system, NFTs should be used with due care and oversight. Too many nitrogen fixing plants can over nitrify the soil and pollute ground and surface waters. NFTs are not a panacea. Most will not thrive in shade or fertile conditions. Because of their ability to thrive under poor conditions, they can easily become weedy. Therefore, if possible, use only NFTs which are already established in your area, or that have a history of not becoming weeds. NFTs can also become competitive for available soil nutrients, especially in arid areas – careful and informed management practices are advised.

Also, be aware that there are many other significant avenues for nitrogen fixation in nature, such as free-living nitrogen fixing bacteria, which should also be incorporated into a design.

Planting Nitrogen Fixing Trees

Species Selection

A survey of your area will be helpful in determining the habit and vigor of local NFTs. Some are small and produce edible shoots and pods, ideal for home garden use; others are large and fast growing for fuel wood or poles. Decide on what yields you want from your NFTs, and choose a diversity of species.

Seed Pregermination Treatment (Scarification)

In many NFTs, the hard seed coat must be scarified in order to allow absorption of water, hence germination. There are several methods: hot water is the most common. Water temperature should be approximately 70-90C° (160°F). The volume ratio should be 5-10 parts water to one part seeds. Seeds are placed in hot water for 1-3 minutes, then rinsed. Seeds may be soaked overnight at room temperature.

Seeds Inoculation

After scarification, a sticking agent such as vegetable oil or plain water is applied sparingly to seeds, and inoculum dusted into the mix. Seeds should be sown immediately. Do no expose inoculated seeds to extremes in temperature or direct sunlight.


Plant material in the form of bare root seedlings, stump cuttings and branch cuttings should be kept moist and protected until planting. Punch a small hole in the ground with the same diameter as the plant material. Seedlings should be placed in the hole with the root/shoot collar of the tree at soil level. Stump cuttings should be scarified in several places with a sharp knife to promote rooting and put in the ground about one third of their length.


Initially NFTs require moisture and adequate nutrients, as well as protection from weed competition. The best way to achieve these conditions is to amend the soil and sheet mulch at the time of planting.

How Biological Nitrogen Fixation Works in Legumes

Working with a group of bacteria called rhizobia, legumes are able to pull nitrogen out of the air and accumulate it biologically. The bacteria, which are normally free-living in the soil in the native range of a particular legume, infect (inoculate) the root hairs of the plant and are housed in small root structures called nodules. Energy is provided by the plant to feed the bacteria and fuel the nitrogen fixation process. In return, the plant receives nitrogen for growth.

There are thousands of strains of rhizobia. Certain of these will infect many hosts, certain hosts will accept many different strains of rhizobia. Certain hosts may be nodulated by several strains of rhizobia, but growth may be enhanced only by particular strains. Therefore, when introducing hosts to a new area it is extremely important to also introduce a known effective symbiotic rhizobia strain. Such effective strains have been identified for thousands of the important nitrogen fixing legumes, and can be purchased at low cost for the value returned. The best method for ensuring effective nitrogen fixation is introduce a known effective strain of rhizobium to the potting medium at the time of sowing. Large, healthy nodules may also be used to inoculate seeds. To determine if the nodule is effective, it may be cut open. Effective nodules will have a reddish pigment inside.

In conventional monoculture of legumes (such as soybean or vetch) it is estimated that 50-800kg of nitrogen per hectare per year are accumulated by nitrogen fixing plants, depending on species, soil and climate, rhizobium effeciency, and methodology. To artificially manufacture equivalent quantities of nitrogen is an expensive, energy intensive process, and the final form of this product can be detrimental to the overall soil ecology.

Craig Elevitch is based in Hawaii and has been working for island resource self-sufficiency since 1989. He directs Agroforestry Net, a nonprofit educational organization dedicated to empowering people in agroforestry and ecological resource management. The organization’s internationally recognized publications have guided thousands of readers in becoming more proficient in ecological food production, agroforestry, and permaculture. Craig edits The Overstory, a monthly agroforestry journal with over 8,000 subscribers in 185 countries. His books include Agroforestry Guides for Pacific Islands (2000), The Overstory Book: Cultivating Connections with Trees (2004), and Traditional Trees of Pacific Islands: Their Culture, Environment, and Use (2006), all of which promote diverse agricultural systems that produce abundant food and other resources. Further information and free downloads at


  1. Dear Sir/Madam,

    Has anyone tried to grow concerned legume in the compost pit and mulch the same before flowering to increase the required strain/s of the rhizobia in the compost? Do think this techonogy can be adopted by the farmers?

    For e.g. a farmers wants to grow soybean. Instead of seed coating of commercially available rhizobium, can he coat the seeds with compost (which is enriched with required strains of rhizobia-above technique) and get a good yield? Do you have any case studies on this.

    Thanking you in advance for your kind attention and for the inforamtion.

  2. Narayana,
    If you read the above, it mentions that rhizobia will not work in enriched or nutrient rich soils, hence it is unlikely to colonise the compost.

  3. 1 Where can I find/purchase inoculant?
    2 Must nitrogen fixing trees be pruned heavily to cause root pruning to make the nitrogen available or do they produce enough excess to feed other plants?

  4. Narayana, The article mentions the most affective way of inoculating seeds & plants is through introducing the optimum strain to the potting soil before planting. So following along this chain of thought if the plant in question were planted in mulched soil that had the correct strain, the affect would be positive.

    As a baer mentioned nitrogen rich soils hinder the process as the plant will basically not utilize the symbiotic relationship with the bacteria.

    Jeremy Gragston, the intention is to prune the trees, compost the material (either naturally, through composting methods, or through animal feed) which then makes nutrients including nitrogen available to surrounding plant life. The mention of roots talked about making nutrients available closer to the surface, and also creating aeration channels which increase fertility of the land.

    Also I would suggest a quick internet search to learn the best strain for your crop, and then to be able to find suppliers. I am also doing this research.

  5. There seems to be good resources on which rhizobium species to use with annuals, but not much on NFTs. Are you able to recommend some resources that map NFT species to compatible rhizobium species? Thanks.

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